DIGESTIVE HEALTH

Functional medicine support for food sensitivities, intolerances and allergies

We take a personalised, root-cause approach to food sensitivities, intolerances, and allergies. Care focuses on identifying what is really driving your reactions, whether that's digestion, gut lining integrity, or immune activity. We use targeted investigation and individualised treatment to support better tolerance and a less restrictive diet.

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Is our food reaction care right for you?

If food reactions have been ongoing or difficult to pin point, particularly when symptoms continue despite removing trigger foods or new sensitivities seem to keep appearing, it can be worth looking more deeply at what may be contributing. Our approach may suit

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You feel frustrated by symptoms that continue despite removing suspected trigger foods

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You want help making sense of multiple sensitivities, delayed reactions, or conflicting test results

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You're looking for a more personalised approach beyond elimination diets alone

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You want to understand what’s driving your reactions

melbourne functional medicine practitioner rebecca hughes discussion food sensitivity test results with health coach

Why food reactions can persist or change

In conventional care, food reactions are often centred around the identification of allergies. Allergies are typically assessed with allergy testing and managed with strict avoidance, while common intolerances are often addressed through recommended dietary restriction.

What can be frustrating is that allergies, intolerances or sensitivities can overlap and be driven by different factors. In our experience, things like impaired digestion, an imbalanced gut microbiome, changes to the gut lining, immune activation, a high histamine load, and repeated exposure to certain foods can all influence how someone reacts.

If these drivers are not addressed, people can stay stuck, avoiding more food without getting closer to feeling well.

Our approach to food sensitivities, intolerances and allergies care

We take a functional medicine approach to your unique food reactions, starting with a detailed assessment of your symptoms, health history, dietary patterns, and the timing of reactions. Part of that is working out whether you’re dealing with an allergy, an intolerance, a sensitivity, or some combination.

Depending on your presentation, care may include:

Dietary strategies

Dietary change is often the starting point. Short-term elimination of confirmed trigger foods may give the immune system less to react to, and allow your gut to begin recovery. This is paired with foods that actively support gut lining repair and a healthier bacterial environment, rather than long-term restriction alone.

Gut lining support
In many people with ongoing food reactions, the gut lining has become more permeable than it should be, allowing food proteins and bacterial fragments to pass into places it shouldn’t, and trigger immune responses. Gut repair is a central part of care. Depending on what your assessment shows, this may include:

  • Zinc and glutamine to help repair and strengthen the gut lining and are among the most commonly used nutrients in this context
  • Herbs, including slippery elm and meadowsweet, have a long history of use for mucosal support
  • Vitamin A may support the immune activity that happens at the gut lining and help maintain its protective function

Microbial support
Where bacterial diversity has been reduced, targeted probiotic and prebiotic support is used alongside dietary changes to help restore a healthier gut environment:

  • Where harmful bacteria or parasites are found on stool testing, these are typically addressed alongside rebuilding beneficial species
  • Specific probiotic strains are selected based on your microbiome needs
  • Prebiotic-rich foods and targeted dietary changes support bacterial recovery over the longer term

Digestive function
Where stomach acid, enzyme output, or gut movement is affecting how food is broken down and absorbed, targeted support is used alongside dietary change. Bitter herbs such as gentian and ginger can support gastric acid production and digestive enzyme activity. Where bile flow is low, herbal support can help improve fat digestion.

Immune support
Some food reactions are in response to an immune system that has become over-reactive to foods it should be tolerating. Rather than suppressing immune activity across the board, herbs such as Echinacea, Albizia lebbeck, and Baical skullcap may help bring that response back to a more appropriate level.

Anti-inflammatory support
Where widespread inflammation appears to be a central part of the picture, herbs such as turmeric and boswellia may be used. Where histamine appears to be contributing to your reactions, quercetin and related nutrients can help calm the immune cells responsible for histamine release.

Nutritional support
Several nutrients are commonly depleted in people with ongoing food reactions. Where deficiencies are identified, support may include:

  • Vitamin D, which can help reduce gut permeability and calm an over-reactive immune response
  • Vitamin C, particularly where histamine is contributing to your reactions, as it is involved in breaking histamine down
  • B vitamins, particularly B12 and folate, which are commonly low when gut absorption has been affected by ongoing reactivity
  • Magnesium, which supports immune regulation and is frequently depleted when the body is carrying a high inflammatory load
  • N-acetyl cysteine, which supports the body’s antioxidant defences and may help reduce inflammatory activity at the gut lining

How we investigate food reactions

Testing is guided by your history, symptom pattern, and the type of reaction suspected. Where it’s needed, it’s selected to clarify how your immune system is responding, how well you’re digesting food, and what else may be keeping reactions going. Testing may include:

  • Advanced dietary antigen testing for IgG, and IgE reactions
  • Digestive function tests
  • Microbiome testing
  • Markers of inflammation
  • Nutrient deficiency testing
rebecca hughes functional medicine practitioner smiling checking childs health in clinic
(Amy is a real patient but we’ve changed her name and image to protect her privacy.)

Case study

See how our approach helps our patients achieve better health and richer lives.

Amy, 11, came to us with tiny bumps on her forehead, making her self-conscious at school. Her mother also noted unusual body odour for her age. Amy was constipated (bowel movements every second day), had tummy pain, and snored loudly. An ENT specialist recommended surgery for her enlarged adenoids. Family history revealed food sensitivities in her sister and father.

Read Amy’s story by hitting the button below

We support people with food reactions to optimal health

We’ve helped thousands of people with food reactions to not only reclaim their health but to enjoy life with vitality. Start your care journey today.

Your digestive health care team

GETTING STARTED

Choose how you'd like to begin

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3-hour initial apt

3-hour initial appointment

  • Comprehensive deep dive into your health picture
  • Ideal for complex or longstanding concerns
  • Root-cause mapping and strategy session
  • Get your personalised health mindmap

Start with a deep dive

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1-hour initial apt

1-hour initial appointment

  • Review your health history and current concerns
  • Receive testing and treatment recommendations
  • Leave with a clear plan to get started

A focussed starting point

WHAT PATIENTS SAY

Why Melbourne Functional Medicine is trusted for Food sensitivities, allergies and intolerances

Patient experiences

Our award winning approach is personalised, collaborative and focused on your health.
See what past patients say about their experience below.

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Frequently

Asked

Questions

Can this help if I have already tried elimination diets?

Yes, this is a common reason people seek our support. Elimination diets can reduce symptoms, but they do not always explain why reactions developed or why new foods have started causing problems. A deeper and broader clinical assessment can help identify whether digestion, microbiome balance, gut barrier integrity, immune reactivity, or another driver is involved.

Can food intolerances be reversed?

In some cases, yes, particularly when the cause is impaired digestion, an imbalanced microbiome, or gut barrier changes, all of which can improve with the right support. That is different from a true IgE-mediated allergy, which needs a more cautious approach and may require ongoing avoidance. Part of the assessment is working out what kind of reaction you’re dealing with.

Do you offer food sensitivity testing in Melbourne and via telehealth?

Yes. Testing can be arranged for people in Melbourne and across Australia via telehealth. Your practitioner will decide which tests are relevant based on your symptoms, history, and the type of food reaction suspected. Not everyone needs the same work-up, so testing is selected to be clinically useful rather than routine.

Can food reactions affect more than digestion?

Yes. While digestive symptoms are common, food reactions can also affect skin, energy, headaches, mood, or how you feel overall after eating. 

Where can I learn more about food reactions?

For a deeper look at how food reactions affect the body and why symptoms can persist, read our detailed guide to food sensitivities, intolerances and allergies.

Ready for a more personalised path forward?

We work with you to get to the bottom of why your food reactions keep happening, and what it takes to feel less reactive and less restricted.